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          <td width="10%" class="headerItem">Current view:</td>
          <td width="35%" class="headerValue"><a href="../../../../../../../../index.html">directory</a> - <a href="index.html">home/andres/Programacion/aso_coverage/aso/src/ASO/framework</a> - plugin_admin.h (source / <a href="plugin_admin.h.func.html">functions</a>)</td>
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          <td width="10%" class="headerCovTableHead">Found</td>
          <td width="10%" class="headerCovTableHead">Hit</td>
          <td width="15%" class="headerCovTableHead">Coverage</td>
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          <td></td>
          <td class="headerItem">Test:</td>
          <td class="headerValue">cover.info</td>
          <td class="headerItem">Lines:</td>
          <td class="headerCovTableEntry">15</td>
          <td class="headerCovTableEntry">15</td>
          <td class="headerCovTableEntryHi">100.0 %</td>
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          <td></td>
          <td class="headerItem">Date:</td>
          <td class="headerValue">2010-08-03</td>
          <td class="headerItem">Functions:</td>
          <td class="headerCovTableEntry">6</td>
          <td class="headerCovTableEntry">6</td>
          <td class="headerCovTableEntryHi">100.0 %</td>
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      <td><pre class="source">
<a name="1"><span class="lineNum">       1 </span>                : /**</a>
<span class="lineNum">       2 </span>                :  * \file  plugin_admin.h
<span class="lineNum">       3 </span>                :  * \brief Definition and Implementation of PluginAdmin class.
<span class="lineNum">       4 </span>                :  *
<span class="lineNum">       5 </span>                :  * ASO: Antiviral Sequence Optimizer
<span class="lineNum">       6 </span>                :  * &lt;http://aso.googlecode.com/&gt;
<span class="lineNum">       7 </span>                :  * Copyright (C) 2010 Velez Ezequiel, Peralta Andres, FuDePAN
<span class="lineNum">       8 </span>                :  *
<span class="lineNum">       9 </span>                :  * This file is part of the ASO project.
<span class="lineNum">      10 </span>                :  *
<span class="lineNum">      11 </span>                :  * Contents:       Header file for ASO providing class PluginAdmin.
<span class="lineNum">      12 </span>                :  *
<span class="lineNum">      13 </span>                :  * System:         ASO
<span class="lineNum">      14 </span>                :  * Language:       C++
<span class="lineNum">      15 </span>                :  *
<span class="lineNum">      16 </span>                :  * Author:         Velez Ezequiel, Peralta Andres
<span class="lineNum">      17 </span>                :  * E-Mail:
<span class="lineNum">      18 </span>                :  *
<span class="lineNum">      19 </span>                :  * ASO is free software: you can redistribute it and/or modify
<span class="lineNum">      20 </span>                :  * it under the terms of the GNU General Public License as published by
<span class="lineNum">      21 </span>                :  * the Free Software Foundation, either version 3 of the License, or
<span class="lineNum">      22 </span>                :  * (at your option) any later version.
<span class="lineNum">      23 </span>                :  *
<span class="lineNum">      24 </span>                :  * ASO is distributed in the hope that it will be useful,
<span class="lineNum">      25 </span>                :  * but WITHOUT ANY WARRANTY; without even the implied warranty of
<span class="lineNum">      26 </span>                :  * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
<span class="lineNum">      27 </span>                :  * GNU General Public License for more details.
<span class="lineNum">      28 </span>                :  *
<span class="lineNum">      29 </span>                :  * You should have received a copy of the GNU General Public License
<span class="lineNum">      30 </span>                :  * along with ASO.  If not, see &lt;http://www.gnu.org/licenses/&gt;.
<span class="lineNum">      31 </span>                :  *
<span class="lineNum">      32 </span>                :  */
<span class="lineNum">      33 </span>                : 
<span class="lineNum">      34 </span>                : #ifndef PLUGIN_ADMIN_H
<span class="lineNum">      35 </span>                : #define PLUGIN_ADMIN_H
<span class="lineNum">      36 </span>                : 
<span class="lineNum">      37 </span>                : #include &lt;mili/mili.h&gt;
<span class="lineNum">      38 </span>                : #include &quot;libpluginaso.h&quot;
<span class="lineNum">      39 </span>                : 
<span class="lineNum">      40 </span>                : typedef std::string FileName;
<span class="lineNum">      41 </span>                : 
<span class="lineNum">      42 </span>                : /* Definición de la Clase PluginAdmin */
<span class="lineNum">      43 </span>                : class PluginAdmin
<span class="lineNum">      44 </span>                : {
<span class="lineNum">      45 </span>                : private:
<span class="lineNum">      46 </span>                :     Plugin* plg;
<span class="lineNum">      47 </span>                :     void* handle;
<span class="lineNum">      48 </span>                : 
<a name="49"><span class="lineNum">      49 </span>                : public:</a>
<span class="lineNum">      50 </span>                :     /*! Constructor */
<span class="lineNum">      51 </span><span class="lineCov">              1 :     PluginAdmin(): plg(NULL), handle()</span>
<span class="lineNum">      52 </span><span class="lineCov">              1 :     {}</span>
<a name="53"><span class="lineNum">      53 </span>                : </a>
<span class="lineNum">      54 </span>                :     /*! Obtener el menor puntaje del score. */
<span class="lineNum">      55 </span><span class="lineCov">              1 :     inline Score get_min_score() const</span>
<span class="lineNum">      56 </span>                :     {
<span class="lineNum">      57 </span><span class="lineCov">              1 :         return plg-&gt;get_min_scoring_value();</span>
<span class="lineNum">      58 </span>                :     }
<a name="59"><span class="lineNum">      59 </span>                : </a>
<span class="lineNum">      60 </span>                :     /*! Obtener la lista de parámetros del plugin. */
<span class="lineNum">      61 </span><span class="lineCov">              1 :     inline void get_params(ParameterList&amp; params) const</span>
<span class="lineNum">      62 </span>                :     {
<span class="lineNum">      63 </span><span class="lineCov">              1 :         plg-&gt;get_params(params);</span>
<span class="lineNum">      64 </span><span class="lineCov">              1 :     }</span>
<a name="65"><span class="lineNum">      65 </span>                : </a>
<span class="lineNum">      66 </span>                :     /*! Obtener la política de Generación del plugin. */
<span class="lineNum">      67 </span><span class="lineCov">              1 :     inline GenerationPolicy* get_generation_policy() const</span>
<span class="lineNum">      68 </span>                :     {
<span class="lineNum">      69 </span><span class="lineCov">              1 :         return plg-&gt;get_generation_policy();</span>
<span class="lineNum">      70 </span>                :     }
<span class="lineNum">      71 </span>                : 
<span class="lineNum">      72 </span>                :     /*! Obtener la validación de la combinación. */
<span class="lineNum">      73 </span>                :     inline bool validate_combination(const AntiviralSet&amp; antivirals) const
<span class="lineNum">      74 </span>                :     {
<span class="lineNum">      75 </span>                :         return plg-&gt;validate_combination(antivirals);
<span class="lineNum">      76 </span>                :     }
<a name="77"><span class="lineNum">      77 </span>                : </a>
<span class="lineNum">      78 </span>                :     /*! Crear un nodo de terapia. */
<span class="lineNum">      79 </span><span class="lineCov">            395 :     inline TherapyNode* create_node(const NucSequence&amp; sequence, TherapyNode *parent, const AntiviralSet&amp; av, DistanceValue value, const size_t id) const</span>
<span class="lineNum">      80 </span>                :     {
<span class="lineNum">      81 </span><span class="lineCov">            395 :         return plg-&gt;create_node(sequence, parent, av, value, id);</span>
<span class="lineNum">      82 </span>                :     }
<a name="83"><span class="lineNum">      83 </span>                : </a>
<span class="lineNum">      84 </span>                :     /*! Obtener la matriz de distancia del plugin. */
<span class="lineNum">      85 </span><span class="lineCov">            313 :     inline void get_distance_matrix(DistanceMatrix&amp; matrix) const</span>
<span class="lineNum">      86 </span>                :     {
<span class="lineNum">      87 </span><span class="lineCov">            313 :         set_default_matrix(matrix);</span>
<span class="lineNum">      88 </span><span class="lineCov">            313 :         plg-&gt;get_distance_matrix(matrix);</span>
<span class="lineNum">      89 </span><span class="lineCov">            313 :     }</span>
<span class="lineNum">      90 </span>                : 
<span class="lineNum">      91 </span>                :     /*! Cargar un Plugin */
<span class="lineNum">      92 </span>                :     bool load_plugin(const FileName&amp; file) throw(BadUseOfGUI);
<span class="lineNum">      93 </span>                : 
<span class="lineNum">      94 </span>                :     /*! Obtener el nombre del plugin */
<span class="lineNum">      95 </span>                :     inline const std::string&amp; get_name() const
<span class="lineNum">      96 </span>                :     {
<span class="lineNum">      97 </span>                :         return plg-&gt;get_name();
<span class="lineNum">      98 </span>                :     }
<span class="lineNum">      99 </span>                : 
<span class="lineNum">     100 </span>                :     /*! Descargar el plugin actual. */
<span class="lineNum">     101 </span>                :     void unload_plugin();
<span class="lineNum">     102 </span>                :     /*! Chequea la consistencia de la base de datos.  */
<span class="lineNum">     103 </span>                :     bool check_plugin(AVIterator aIt, AntiviralsNames&amp; rejectedAntivirals);
<span class="lineNum">     104 </span>                : };
<span class="lineNum">     105 </span>                : 
<span class="lineNum">     106 </span>                : #endif
</pre>
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